## Reading in : Callahan_1.CEL
## Reading in : Callahan_10.CEL
## Reading in : Callahan_11.CEL
## Reading in : Callahan_13.CEL
## Reading in : Callahan_14.CEL
## Reading in : Callahan_15.CEL
## Reading in : Callahan_16.CEL
## Reading in : Callahan_18.CEL
## Reading in : Callahan_19.CEL
## Reading in : Callahan_2.CEL
## Reading in : Callahan_20.CEL
## Reading in : Callahan_21.CEL
## Reading in : Callahan_22.CEL
## Reading in : Callahan_23.CEL
## Reading in : Callahan_24.CEL
## Reading in : Callahan_26.CEL
## Reading in : Callahan_27.CEL
## Reading in : Callahan_29.CEL
## Reading in : Callahan_3.CEL
## Reading in : Callahan_30.CEL
## Reading in : Callahan_31.CEL
## Reading in : Callahan_32.CEL
## Reading in : Callahan_33.CEL
## Reading in : Callahan_35.CEL
## Reading in : Callahan_36.CEL
## Reading in : Callahan_37.CEL
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## Reading in : Callahan_39.CEL
## Reading in : Callahan_4.CEL
## Reading in : Callahan_41.CEL
## Reading in : Callahan_42.CEL
## Reading in : Callahan_43.CEL
## Reading in : Callahan_44.CEL
## Reading in : Callahan_47.CEL
## Reading in : Callahan_48.CEL
## Reading in : Callahan_49.CEL
## Reading in : Callahan_50.CEL
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## Reading in : Callahan_52.CEL
## Reading in : Callahan_53.CEL
## Reading in : Callahan_6.CEL
## Reading in : Callahan_7.CEL
## Reading in : Callahan_8.CEL
## Raw data QC Plots ......
## group : Balb12wk
## group : Balb3wkInv
## group : Balb5wk
## group : Balb6dPregnant
## group : Balb7dLactation
## group : FVB12wk
## group : FVB12wkInv
## group : FVB3wkInv
## group : FVB5wk
## group : FVB6dPregnant
## group : FVB7dLactation
## RLE and NUSE Plots ...
##
## Probset presence Plot ...
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## Post-Normalization plots ......
## Background correcting
## Normalizing
## Calculating Expression
## group : Balb12wk after normalization
## group : Balb3wkInv after normalization
## group : Balb5wk after normalization
## group : Balb6dPregnant after normalization
## group : Balb7dLactation after normalization
## group : FVB12wk after normalization
## group : FVB12wkInv after normalization
## group : FVB3wkInv after normalization
## group : FVB5wk after normalization
## group : FVB6dPregnant after normalization
## group : FVB7dLactation after normalization
## PCA and clustering plots ...
##
## Limma, DEG and MAplot ......
##